Prediction : n-1-methylindolizin-3-yl-phenyl-methylenethiophene-2-sulfonamide - albumin

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Reference

When using this server please cite the following paper:

Zsila F, Bikadi Z, Malik D, Hari P, Pechan I, Berces A, Hazai E.

Evaluation of drug-human serum albumin binding interactions with support vector machine aided online automated docking.

Bioinformatics. 2011 May 18.

Prediction summary

SVM prediction results:

SVM : albumin prediction

Prediction result: Albumin ligand (prediction accuracy: 92.1%), binding site 1 (prediction accuracy: 80.0%)

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Please note that binding site 3 prediction is not included in the built in SVM model.

Calculated physicochemical properties:

Molecular Weight	=	380.520
logP	=	5.604
Ghose-Viswanadhan-Wendoloski antiinflammatory-like index	=	0.000
number of carboxylic acids (aliphatic)	=	0
number of substituted benzene C(sp2)	=	1

Ligand Similarity:

In the following tables the similarities of the query compound to the original X-Ray compunds are presented. Similarity is calculated based on Tanimoto fingerprints. The value ranges from 0 to 1, with 1 being identical to the original X-Ray compound.

Site 1_IIA
Indomethacin	0.249
Compound 1	0.225
Compound 2	0.218
Dansyl-L-asparagine	0.182
Azapropazone	0.176
Iodipamide	0.155
L-Thyroxine	0.117
R-Warfarin	0.112
Salicylic acid	0.103
Diiodosalicylic acid	0.101
Phenylbutazone	0.098
CMPF	0.080

Site 2_IIIA
Dansyl-L-norvaline	0.197
Dansyl-L-sarcosine	0.188
Diazepam	0.176
Indoxyl sulphate	0.151
(S)-Ibuprofen	0.128
Propofol	0.120
L-Thyroxine	0.117
Diflunisal	0.089

Site 3_IB
Compound 3	0.206
Azapropazone	0.184
Bilirubin	0.173
Fusidic acid	0.090

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Chemical structure