Prediction : 25-dichlorothiophene-3-carboxylic-acid-2-keto-2-2-methyl-1h-indol-3-ylethyl-ester - albumin

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Reference

When using this server please cite the following paper:

Zsila F, Bikadi Z, Malik D, Hari P, Pechan I, Berces A, Hazai E.

Evaluation of drug-human serum albumin binding interactions with support vector machine aided online automated docking.

Bioinformatics. 2011 May 18.



Prediction summary

SVM prediction results:


SVM : albumin prediction

Prediction result: Albumin ligand (prediction accuracy: 92.1%), binding site 1 (prediction accuracy: 80.0%)




Please note that binding site 3 prediction is not included in the built in SVM model.





Calculated physicochemical properties:

Molecular Weight = 368.250 
logP = 4.174 
Ghose-Viswanadhan-Wendoloski antiinflammatory-like index = 1.000 
number of carboxylic acids (aliphatic) = 0 
number of substituted benzene C(sp2) = 2 


Ligand Similarity:

In the following tables the similarities of the query compound to the original X-Ray compunds are presented. Similarity is calculated based on Tanimoto fingerprints. The value ranges from 0 to 1, with 1 being identical to the original X-Ray compound.

Site 1_IIA
Indomethacin0.413
Compound 10.280
Compound 20.273
Azapropazone0.206
Iodipamide0.187
Dansyl-L-asparagine0.174
L-Thyroxine0.171
Diiodosalicylic acid0.157
Salicylic acid0.148
CMPF0.138
Phenylbutazone0.126
R-Warfarin0.119
Site 2_IIIA
Diazepam0.188
(S)-Ibuprofen0.183
Dansyl-L-norvaline0.182
Indoxyl sulphate0.180
L-Thyroxine0.171
Dansyl-L-sarcosine0.167
Diflunisal0.153
Propofol0.123
Site 3_IB
Azapropazone0.216
Compound 30.197
Bilirubin0.171
Fusidic acid0.109

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Chemical structure