Prediction : 2-acetyl-5-phenyl-1-piperidino-pyrrolizin-3-one - albumin

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Reference

When using this server please cite the following paper:

Zsila F, Bikadi Z, Malik D, Hari P, Pechan I, Berces A, Hazai E.

Evaluation of drug-human serum albumin binding interactions with support vector machine aided online automated docking.

Bioinformatics. 2011 May 18.

Prediction summary

SVM prediction results:

SVM : albumin prediction

Prediction result: Albumin ligand (prediction accuracy: 92.1%), binding site 1 (prediction accuracy: 80.0%)

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Please note that binding site 3 prediction is not included in the built in SVM model.

Calculated physicochemical properties:

Molecular Weight	=	320.420
logP	=	3.556
Ghose-Viswanadhan-Wendoloski antiinflammatory-like index	=	1.000
number of carboxylic acids (aliphatic)	=	0
number of substituted benzene C(sp2)	=	1

Ligand Similarity:

In the following tables the similarities of the query compound to the original X-Ray compunds are presented. Similarity is calculated based on Tanimoto fingerprints. The value ranges from 0 to 1, with 1 being identical to the original X-Ray compound.

Site 1_IIA
Compound 2	0.296
Compound 1	0.276
Azapropazone	0.238
Indomethacin	0.211
Iodipamide	0.197
Phenylbutazone	0.184
R-Warfarin	0.115
L-Thyroxine	0.115
Dansyl-L-asparagine	0.115
Salicylic acid	0.088
Diiodosalicylic acid	0.087
CMPF	0.080

Site 2_IIIA
Diazepam	0.142
Diflunisal	0.132
Indoxyl sulphate	0.123
L-Thyroxine	0.115
Dansyl-L-norvaline	0.110
Dansyl-L-sarcosine	0.087
(S)-Ibuprofen	0.087
Propofol	0.079

Site 3_IB
Bilirubin	0.310
Azapropazone	0.216
Compound 3	0.199
Fusidic acid	0.112

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Chemical structure