Prediction : 2-4-34-dichlorobenzoylpiperazin-1-ium-1-yl-1-2r-2-methylpiperidinoethanone - albumin

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Reference

When using this server please cite the following paper:

Zsila F, Bikadi Z, Malik D, Hari P, Pechan I, Berces A, Hazai E.

Evaluation of drug-human serum albumin binding interactions with support vector machine aided online automated docking.

Bioinformatics. 2011 May 18.

Prediction summary

SVM prediction results:

SVM : albumin prediction

Prediction result: Non albumin ligand (prediction accuracy: 92.1%)

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Please note that binding site 3 prediction is not included in the built in SVM model.

Calculated physicochemical properties:

Molecular Weight	=	399.380
logP	=	1.743
Ghose-Viswanadhan-Wendoloski antiinflammatory-like index	=	1.000
number of carboxylic acids (aliphatic)	=	0
number of substituted benzene C(sp2)	=	3

Ligand Similarity:

In the following tables the similarities of the query compound to the original X-Ray compunds are presented. Similarity is calculated based on Tanimoto fingerprints. The value ranges from 0 to 1, with 1 being identical to the original X-Ray compound.

Site 1_IIA
Compound 2	0.327
Indomethacin	0.315
Compound 1	0.295
Iodipamide	0.267
Phenylbutazone	0.200
Salicylic acid	0.200
Diiodosalicylic acid	0.196
L-Thyroxine	0.191
Azapropazone	0.188
Dansyl-L-asparagine	0.162
R-Warfarin	0.153
CMPF	0.101

Site 2_IIIA
Diazepam	0.229
L-Thyroxine	0.191
Diflunisal	0.186
(S)-Ibuprofen	0.182
Dansyl-L-norvaline	0.173
Propofol	0.160
Dansyl-L-sarcosine	0.159
Indoxyl sulphate	0.090

Site 3_IB
Azapropazone	0.188
Bilirubin	0.146
Compound 3	0.117
Fusidic acid	0.104

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Chemical structure